Table 1 Genes from the Pen Operon (RHA1_ro02898 - RHA1_ro02909) overexpressed in R. jostii RHA1 ALE-xyl strain growing in xylose
Locus | Size (bp) | Name | log2 FoldChange | p-value |
|---|---|---|---|---|
RHA1_ro02897 | 504 | acyl-CoA thioesterase | 4.53 | 2.73E-207 |
RHA1_ro02898 penK | 1455 | NADP + dependent aldehyde dehydrogenase | 4.24 | 1.29E-297 |
RHA1_ro02899 penJ | 759 | ribose-5-phosphate isomerase. RpiA | 4.60 | 2.76E-240 |
RHA1_ro02900 penI | 651 | phosphoglycolate phosphatase | 4.78 | 5.57E-229 |
RHA1_ro02901 penH | 1533 | xylulokinase | 4.48 | 0.00E + 00 |
RHA1_ro02902 penG | 1437 | aldehyde dehydrogenase / succinate-semialdehyde dehydrogenase | 4.46 | 0.00E + 00 |
RHA1_ro02903 penF | 951 | D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase | 5.50 | 0.00E + 00 |
RHA1_ro02904 penE | 1188 | fumarylacetoacetate hydrolase family protein | 5.33 | 0.00E + 00 |
RHA1_ro02905 penD | 717 | SDR family oxidoreductase | 5.72 | 0.00E + 00 |
RHA1_ro02906 penC | 1050 | ABC transporter permease | 5.67 | 0.00E + 00 |
RHA1_ro02907 penB | 1551 | sugar ABC transporter ATP-binding protein | 5.23 | 0.00E + 00 |
RHA1_ro02908 penA | 1047 | substrate-binding domain-containing protein | 5.41 | 0.00E + 00 |
RHA1_ro02909 penR | 705 | FadR/GntR family transcriptional regulator | 2.77 | 2.57E-167 |