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  1. This study addresses the challenges in the early diagnosis of deep infiltrating endometriosis (DIE) by exploring the potential role of the deubiquitinating enzyme USP14. By analyzing the GSE141549 dataset from...

    Authors: Shanping Shi, Chao Huang, Xiaojian Tang, Hua Liu, Weiwei Feng and Chen Chen
    Citation: Journal of Biological Engineering 2024 18:70
  2. Yeast Saccharomyces cerevisiae is widely recognised as a versatile chassis for constructing microbial cell factories. However, producing chemicals from toxic, highly concentrated, or cell-impermeable substrates, ...

    Authors: Tea Martinić Cezar, Nenad Marđetko, Antonija Trontel, Antonia Paić, Anita Slavica, Renata Teparić and Bojan Žunar
    Citation: Journal of Biological Engineering 2024 18:69
  3. The successful production of industrially relevant natural products hinges on two key factors: the cultivation of robust microbial chassis capable of synthesizing the desired compounds, and the availability of...

    Authors: Andrés Felipe Carrillo Rincón, Alexandra J. Cabral, Andras Gyorgy and Natalie G. Farny
    Citation: Journal of Biological Engineering 2024 18:68
  4. Mitochondrial abnormalities underscore a variety of neurologic injuries and diseases and are well-studied in adult populations. Clinical studies identify critical roles of mitochondria in a wide range of devel...

    Authors: Brendan Butler, Malcolm Renney, Kristin Bennett, Gisele Charpentier and Elizabeth Nance
    Citation: Journal of Biological Engineering 2024 18:67
  5. Peptide drugs have seen rapid advancement in biopharmaceutical development, with over 80 candidates approved globally. Despite their therapeutic potential, the clinical translation of peptide drugs is hampered...

    Authors: Sourik Dey, Carsten E. Seyfert, Claudia Fink-Straube, Andreas M. Kany, Rolf Müller and Shrikrishnan Sankaran
    Citation: Journal of Biological Engineering 2024 18:66
  6. The NK-92MI cell line has displayed significant promise in clinical trials for cancer treatment. However, challenges persist in obtaining sufficient cell quantities and achieving optimal cytotoxicity. The prol...

    Authors: Jhih-Ni Lin, Che-Yung Kuan, Chia-Ting Chang, Zhi-Yu Chen, Wei-Ting Kuo, Jason Lin, Yu-Ying Lin, I.-Hsuan Yang and Feng-Huei Lin
    Citation: Journal of Biological Engineering 2024 18:65
  7. De-novo-designed synthetic transcriptional regulators have great potential as the genetic parts for constructing complex multilayered gene circuits. The design flexibility afforded by advanced nucleic acid seq...

    Authors: Mingming Zhao, Jeongwon Kim, Jiayan Jiao, Yelin Lim, Xianai Shi, Shaobin Guo and Jongmin Kim
    Citation: Journal of Biological Engineering 2024 18:64
  8. Adenosine triphosphate (ATP) assays have a faster turnaround time and higher sensitivity than traditional cultivation methods for microbial monitoring. Challenges implementing ATP testing include incompatibili...

    Authors: William S. Chen, Leili Abkar and Madjid Mohseni
    Citation: Journal of Biological Engineering 2024 18:63
  9. The production of value-added bio-compounds from rejuvenated sources and their recruitment for healthcare services are paramount objectives in the agenda of white biotechnology. Hereupon, the current study foc...

    Authors: Marwa Eltarahony, Nehal El-deeb, Marwa Abu‑Serie and Hadeel El‑Shall
    Citation: Journal of Biological Engineering 2024 18:62
  10. Type 2 diabetes mellitus (T2DM) is a major public health concern with significant cardiovascular complications (CVD). Despite extensive epidemiological data, the molecular mechanisms relating hyperglycemia to ...

    Authors: Smriti Bohara, Atefeh Bagheri, Elif G. Ertugral, Igor Radzikh, Yana Sandlers, Peng Jiang and Chandrasekhar R. Kothapalli
    Citation: Journal of Biological Engineering 2024 18:61
  11. Hydroxyapatite (HA) is a bioceramic material widely used as a bone biomimetic substitute and can be synthesized by biomineralization, according to which HA nanoparticles are formed on a polymer template. Never...

    Authors: Franco Furlani, Matilde Clarissa Malfatti, Alfredo Rondinella, Elisabetta Campodoni, Monica Sandri, Lorenzo Fedrizzi and Gianluca Tell
    Citation: Journal of Biological Engineering 2024 18:60
  12. Cerebroside sulfotransferase (CST) is considered as therapeutic target for substrate reduction therapy (SRT) for metachromatic leukodystrophy (MLD). The present study evaluates the therapeutic potential of 57 ...

    Authors: Nivedita Singh and Anil Kumar Singh
    Citation: Journal of Biological Engineering 2024 18:59
  13. Mesenchymal stromal cell derived extracellular vesicles (MSC-EVs) are a promising therapeutic for neuroinflammation. MSC-EVs can interact with microglia, the resident immune cells of the brain, to exert their ...

    Authors: Kanupriya R. Daga, Andrew M. Larey, Maria G. Morfin, Kailin Chen, Sara Bitarafan, Jana M. Carpenter, Hannah M. Hynds, Kelly M. Hines, Levi B. Wood and Ross A. Marklein
    Citation: Journal of Biological Engineering 2024 18:58
  14. During the production of bispecific antibodies (bsAbs), nonspecific pairing results in low yields of target bsAb molecules, an issue known as the “mispairing problem.” Several antibody engineering techniques h...

    Authors: Jyunna Yoshida, Yuki Kato, Ai Isogawa, Yoshikazu Tanaka, Izumi Kumagai, Ryutaro Asano, Takeshi Nakanishi and Koki Makabe
    Citation: Journal of Biological Engineering 2024 18:57
  15. Schizochytrium, a group of eukaryotic marine protists, is an oleaginous strain, making it a highly promising candidate for the production of lipid-derived products such as biofuels and omega-3 fatty acids. Howeve...

    Authors: Ae Jin Ryu, Won-Sub Shin, Sunghoon Jang, Yejin Lin, Yejee Park, Yujung Choi, Ji Young Kim and Nam Kyu Kang
    Citation: Journal of Biological Engineering 2024 18:56
  16. Authors: Sara Khaleghi, Farideh Eivazkhani, Somayeh Tavana, Ashraf Moini, Marefat Ghaffari Novin, Petkov Stoyan, Hamid Nazarian and Rouhollah Fathi
    Citation: Journal of Biological Engineering 2024 18:55

    The original article was published in Journal of Biological Engineering 2023 17:70

  17. Komagataella phaffii (K. phaffii), formerly known as Pichia pastoris, is a widely utilized yeast for recombinant protein production. However, due to the formation of overflow metabolites, carbon yields may be red...

    Authors: Thomas Steimann, Judith Wegmann, Monica I. Espinosa, Lars Mathias Blank, Jochen Büchs, Marcel Mann and Jørgen Barsett Magnus
    Citation: Journal of Biological Engineering 2024 18:54
  18. The clustered regulatory interspaced short palindromic repeats (CRISPR)-Cas13a system has strong potential for highly sensitive detection of exogenous sequences. The detection of KRASG12 point mutations with low ...

    Authors: Samuel Amintas, Grégoire Cullot, Mehdi Boubaddi, Julie Rébillard, Laura Karembe, Béatrice Turcq, Valérie Prouzet-Mauléon, Aurélie Bedel, François Moreau-Gaudry, David Cappellen and Sandrine Dabernat
    Citation: Journal of Biological Engineering 2024 18:53
  19. RNA recognition motifs (RRMs) are widespread RNA-binding protein domains in eukaryotes, which represent promising synthetic biology tools due to their compact structure and efficient activity. Yet, their use i...

    Authors: Roswitha Dolcemascolo, Raúl Ruiz, Sara Baldanta, Lucas Goiriz, María Heras-Hernández, Roser Montagud-Martínez and Guillermo Rodrigo
    Citation: Journal of Biological Engineering 2024 18:52
  20. Before embarking on any experimental research endeavor, it is advisable to do a mathematical computation and thoroughly examine the methodology. Despite the use of polymeric nanocarriers, the regulation of bio...

    Authors: Reza Maleki, Mohammad Khedri, Sima Rezvantalab and Nima Beheshtizadeh
    Citation: Journal of Biological Engineering 2024 18:49
  21. Nearly 60 million people worldwide are infected with Hepatitis C Virus (HCV), a bloodborne pathogen which leads to liver cirrhosis and increases the risk of hepatocellular carcinoma. Those with limited access ...

    Authors: Anna S. Baber, Baviththira Suganthan and Ramaraja P. Ramasamy
    Citation: Journal of Biological Engineering 2024 18:48
  22. Epithelial tissues respond strongly to the mechanical stress caused by collective cell migration and are able to regulate it, which is important for biological processes such as morphogenesis, wound healing, a...

    Authors: Ivana Pajic-Lijakovic, Milan Milivojevic and Peter V. E. McClintock
    Citation: Journal of Biological Engineering 2024 18:47
  23. Effective enzyme stabilization through immobilization is essential for the functional usage of enzymatic reactions. We propose a new method for synthesizing elastic hydroxyapatite microgel (E-HAp-M) materials ...

    Authors: Hyo Won Jeon, Jun Seop Lee, Chan Hee Lee, Dain Kim, Hye Sun Lee and Ee Taek Hwang
    Citation: Journal of Biological Engineering 2024 18:46
  24. Microphysiological systems (MPS) offer simulation of (patho)physiological parameters. Investigation includes items which lead to fibrosis and calcification in development and progress of calcific aortic valve ...

    Authors: Claudia Dittfeld, Florian Schmieder, Stephan Behrens, Anett Jannasch, Klaus Matschke, Frank Sonntag and Sems-Malte Tugtekin
    Citation: Journal of Biological Engineering 2024 18:45
  25. Considerable attention has been paid to exploring the biotechnological applications of several Monascus sp. for pigment production. In this study, our focus is on enhancing the bioprocessing of red pigment (RP) d...

    Authors: El-Sayed R. El-Sayed, Shaimaa A. Mousa, Tomasz Strzała and Filip Boratyński
    Citation: Journal of Biological Engineering 2024 18:44
  26. The demand for fish protein continues to increase and currently accounts for 17% of total animal protein consumption by humans. About 90% of marine fish stocks are fished at or above maximum sustainable levels...

    Authors: Mukunda Goswami, Reza Ovissipour, Claire Bomkamp, Nitin Nitin, Wazir Lakra, Mark Post and David L. Kaplan
    Citation: Journal of Biological Engineering 2024 18:43
  27. Endometriosis (EMs) is an enigmatic disease of yet-unknown pathogenesis. Disulfidptosis, a novel identified form of programmed cell death resulting from disulfide stress, stands a chance of treating diverse ai...

    Authors: Xiaoxuan Zhao, Yang Zhao, Yuanyuan Zhang, Qingnan Fan, Huanxiao Ke, Xiaowei Chen, Linxi Jin, Hongying Tang, Yuepeng Jiang and Jing Ma
    Citation: Journal of Biological Engineering 2024 18:42
  28. Hydrogels are formed of crosslinked polymer chains arranged in three-dimensional (3D) networks. These chains have good water-containing capacity and are soft and malleable. Hydrogels have good biocompatibility...

    Authors: Weiming Sun, Wendi Wu, Xiangli Dong and Guohua Yu
    Citation: Journal of Biological Engineering 2024 18:40
  29. Breast cancer remains a challenge for physicians. Metformin, an antidiabetic drug, show promising anticancer properties against cancers. An emerging quantum dot (QD) material improves therapeutic agents’ antic...

    Authors: Ali Akbari, Mohadeseh Nemati, Zohreh Mehri Lighvan, Fereshteh Nazari Khanamiri, Jafar Rezaie and Yousef Rasmi
    Citation: Journal of Biological Engineering 2024 18:38
  30. Heart diseases are caused mainly by chronic oxygen insufficiency (hypoxia), leading to damage and apoptosis of cardiomyocytes. Research into the regeneration of a damaged human heart is limited due to the lack...

    Authors: Zuzanna Iwoń, Ewelina Krogulec, Aleksandra Kierlańczyk, Michał Wojasiński and Elżbieta Jastrzębska
    Citation: Journal of Biological Engineering 2024 18:37
  31. Exosomes are nanovesicles with multiple components used in several applications. Mesenchymal stem cells (MSCs) are well known for their great potential in clinical applications. MSC-derived exosomes (MSC-Exos)...

    Authors: Defa Huang, Haibin Shen, Fangfang Xie, Die Hu, Qing Jin, Yuexin Hu and Tianyu Zhong
    Citation: Journal of Biological Engineering 2024 18:36
  32. Osteoporosis is manifested by decreased bone density and deterioration of bone architecture, increasing the risk of bone fractures Human bone marrow mesenchymal stem cells (hBMSCs)-based tissue engineering ser...

    Authors: Khadija Akter, Youngsun Kim, Eun Ha Choi and Ihn Han
    Citation: Journal of Biological Engineering 2024 18:35
  33. Several treatments for genetic diseases utilizing recombinant adeno-associated viruses (AAVs) have recently gained approval. However, the development of a greater number of therapeutic AAVs is constrained by c...

    Authors: Sergio Milagros, Pablo Ramírez-Ruiz de Erenchun, Maite Guembe, Beatriz Carte, Miriam Méndez, Ander Uribarri and Rafael Aldabe
    Citation: Journal of Biological Engineering 2024 18:34
  34. Cladosporium phlei is a phytopathogenic fungus that produces a pigment called phleichrome. This fungal perylenequinone plays an important role in the production of a photosensitizer that is a necessary component ...

    Authors: Yeji Gwon, Kum-Kang So, Jeesun Chun and Dae-Hyuk Kim
    Citation: Journal of Biological Engineering 2024 18:33
  35. Adiponectin (ADPN) plays a critical role in endocrine and cardiovascular functions, but traditional production methods, such as Escherichia coli and mammalian systems, have faced challenges in generating sufficie...

    Authors: Eunhui Yoo, Hee Jung Choi, Jin-Kyoo Kim, Young Min Kim, Jin Se Park and Jae Yong Han
    Citation: Journal of Biological Engineering 2024 18:32
  36. Alcohol consumption, a pervasive societal issue, poses considerable health risks and socioeconomic consequences. Alcohol-induced hepatic disorders, such as fatty liver disease, alcoholic hepatitis, chronic hep...

    Authors: Wanil Kim, Jin-Ok Chu, Do-Yeon Kim, Soo-Hyeon Lee, Chang-Hyung Choi and Kyung-Ha Lee
    Citation: Journal of Biological Engineering 2024 18:31
  37. Aquaporin-1 (Aqp1), a water channel, has garnered significant interest for cell-based medicine and in vivo synthetic biology due to its ability to be genetically encoded to produce magnetic resonance signals b...

    Authors: Austin D.C. Miller, Soham P. Chowdhury, Hadley W. Hanson, Sarah K. Linderman, Hannah I. Ghasemi, Wyatt D. Miller, Meghan A. Morrissey, Chris D. Richardson, Brooke M. Gardner and Arnab Mukherjee
    Citation: Journal of Biological Engineering 2024 18:30
  38. There is an increasing demand for innovative strategies that effectively promote osteogenesis and enhance bone regeneration. The critical process of bone regeneration involves the transformation of mesenchymal...

    Authors: Mahsa Mohammadzadeh, Masoud Zarei, Hossein Abbasi, Thomas J. Webster and Nima Beheshtizadeh
    Citation: Journal of Biological Engineering 2024 18:29
  39. Periodontitis, a chronic inflammatory condition caused by bacteria, often causes gradual destruction of the components that support teeth, such as the alveolar bone, cementum, periodontal ligament, and gingiva...

    Authors: Mohammad Hosseini Hooshiar, Masoud Amiri Moghaddam, Mohammad Kiarashi, Athraa Y. Al-Hijazi, Abbas Fadel Hussein, Hareth A.Alrikabi, Sara Salari, Samar Esmaelian, Hassan Mesgari and Saman Yasamineh
    Citation: Journal of Biological Engineering 2024 18:28
  40. The demands for novel and efficient therapies have gradually increased with the rising concerns of osteoporosis (OP). The most popular method in promoting bone regeneration during osteoporotic conditions consi...

    Authors: Weilin Zhang, Hongrui Rong, Jinguo Liang, Chao Mao, Zhencong Li, Zhiwen Dai, Dingbin Li, Weixiong Guo, Siyuan Chen, Zhongwei Wang and Jinsong Wei
    Citation: Journal of Biological Engineering 2024 18:27
  41. The Environmental Protection Agency has listed eggshell waste as the 15th most significant food industry pollution hazard. Using eggshell waste as a renewable energy source has been a hot topic recently. There...

    Authors: Soad Abubakr Abdelgalil, Mohamed Mohamed Yousri Kaddah and Gaber Attia Abo-Zaid
    Citation: Journal of Biological Engineering 2024 18:26
  42. Standardized and thoroughly characterized genetic tools are a prerequisite for studying cellular processes to ensure the reusability and consistency of experimental results. The discovery of fluorescent protei...

    Authors: Mario Delgadillo-Guevara, Manuel Halte, Marc Erhardt and Philipp F. Popp
    Citation: Journal of Biological Engineering 2024 18:25
  43. Inertial effects caused by perturbations of dynamical equilibrium during the flow of soft matter constitute a hallmark of turbulence. Such perturbations are attributable to an imbalance between energy storage ...

    Authors: Ivana Pajic-Lijakovic, Milan Milivojevic and Peter V. E. McClintock
    Citation: Journal of Biological Engineering 2024 18:24
  44. The use of single-chain variable fragments (scFvs) for treating human diseases, such as cancer and immune system disorders, has attracted significant attention. However, a critical drawback of scFv is its extr...

    Authors: Eun Byeol Go, Jae Hun Lee, Jeong Haeng Cho, Na Hyun Kwon, Jong-il Choi and Inchan Kwon
    Citation: Journal of Biological Engineering 2024 18:23
  45. The repair of bone defects remains a major challenge in the clinic, and treatment requires bone grafts or bone replacement materials. Existing biomaterials have many limitations and cannot meet the various nee...

    Authors: Wu Huiwen, Liang Shuai, Xie Jia, Deng Shihao, Wei Kun, Yang Runhuai, Qian Haisheng and Li Jun
    Citation: Journal of Biological Engineering 2024 18:22
  46. Kaposiform hemangioendothelioma (KHE) is a rare intermediate vascular tumor with unclear pathogenesis. Recently, three dimensional (3D) cell spheroids and organoids have played an indispensable role in the stu...

    Authors: Yanan Li, Xinglong Zhu, Li Li, Chunjuan Bao, Qin Liu, Ning zhang, Ziyan He, Yi Ji and Ji Bao
    Citation: Journal of Biological Engineering 2024 18:21